Hmmm...in Media Encoder try first encoding to Quicktime and when it asks what kind of Quicktime see if WMV isn't in there someplace. You do the same thing in compressor.
Compressor is pretty good. The jump to Episode is about $700 but I use it every single day.
Rich Rubasch
Tilt Media Inc.
Video Production, Post, Studio Sound Stage
Founder/President/Editor/Designer/Animator
http://www.tiltmedia.com