Boris Red plug-in creating unwanted slo-motion

I'm working on an Avid Adrenaline HD, and my project is 720p 59.94. When I use the Boris Red 3.0 plug-in to create an effect, the rendered result is in slowmotion. I figure this must be because the Red plug-in is working in 29.97, and when I do the render in 59.94, I'm doubling the frames. However, when I check the preferences, it appears the project is set at 59.94. I played around with the import and export media settings (though I think these only apply when using Red as a stand-alone program), and there was no effect. I can't keep my clips in real-time - every time I render, the result is at half speed. Does anyone have any thoughts on what might be happening here?